Rovshan G. Sadygov: search on Z-Library

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1

Unusual conical intersections in the Jahn–Teller effect: The electronically excited states of Li[sub 3]

Sadygov, Rovshan G., Yarkony, David R.

Journal:

The Journal of Chemical Physics

Year:

1999

Language:

english

File:

PDF, 383 KB

english, 1999

2

A Model for Random Sampling and Estimation of Relative Protein Abundance in Shotgun Proteomics

Liu, Hongbin, Sadygov, Rovshan G., Yates, John R.

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 178 KB

english, 2004

3

Measuring protein synthesis using metabolic 2H labeling, high-resolution mass spectrometry, and an algorithm

Takhar Kasumov, Serguey Ilchenko, Ling Li, Nadia Rachdaoui, Rovshan G. Sadygov, Belinda Willard, Arthur J. McCullough, Stephen Previs

Journal:

Analytical Biochemistry

Year:

2011

Language:

english

File:

PDF, 583 KB

english, 2011

4

A Hypergeometric Probability Model for Protein Identification and Validation Using Tandem Mass Spectral Data and Protein Sequence Databases

Sadygov, Rovshan G., Yates, John R.

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 130 KB

english, 2003

5

Dynamics of primary charge separation in bacterial photosynthesis using the multilevel Redfield–Davies secular approach

Rovshan G. Sadygov, Daniel Neuhauser

Journal:

International Journal of Quantum Chemistry

Year:

2002

Language:

english

File:

PDF, 165 KB

english, 2002

6

A Correlation Algorithm for the Automated Quantitative Analysis of Shotgun Proteomics Data

MacCoss, Michael J., Wu, Christine C., Liu, Hongbin, Sadygov, Rovshan, Yates, John R.

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 334 KB

english, 2003

7

High Mass Accuracy Phosphopeptide Identification Using Tandem Mass Spectra

Sadygov, Rovshan G.

Journal:

International Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 154 KB

english, 2012

8

Improved Mass Defect Model for Theoretical Tryptic Peptides

Mitra, Indranil, Nefedov, Alexey V., Brasier, Allan R., Sadygov, Rovshan G.

Journal:

Analytical Chemistry

Year:

2012

Language:

english

File:

PDF, 1.28 MB

english, 2012

9

Altered Retinoic Acid Metabolism in Diabetic Mouse Kidney Identified by 18O Isotopic Labeling and 2D Mass Spectrometry

Starkey, Jonathan M., Zhao, Yingxin, Sadygov, Rovshan G., Haidacher, Sigmund J., LeJeune, Wanda S., Dey, Nilay, Luxon, Bruce A., Kane, Maureen A., Napoli, Joseph L., Denner, Larry, Tilton, Ronald G.,

Journal:

Year:

2010

Language:

english

File:

PDF, 653 KB

english, 2010

10

High-Resolution Mass Spectrometry for In Vivo Proteome Dynamics using Heavy Water Metabolic Labeling

Sadygov, Rovshan G.

Journal:

International Journal of Molecular Sciences

Year:

2020

File:

PDF, 1.28 MB

2020

11

Large-scale database searching using tandem mass spectra: Looking up the answer in the back of the book

Sadygov, Rovshan G, Cociorva, Daniel, Yates, John R

Journal:

Year:

2004

Language:

english

File:

PDF, 219 KB

english, 2004

12

Timepoint Selection Strategy for in Vivo Proteome Dynamics from Heavy Water Metabolic Labeling and LC-MS

Sadygov, Vugar R, Zhang, William, Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2020

Language:

english

File:

PDF, 527 KB

english, 2020

13

Partial Isotope Profiles Are Sufficient for Protein Turnover Analysis Using Closed-Form Equations of Mass Isotopomer Dynamics

Sadygov, Rovshan G.

Journal:

Analytical Chemistry

Year:

2020

File:

PDF, 2.75 MB

2020

14

Central Limit Theorem as an Approximation for Intensity-Based Scoring Function

Sadygov, Rovshan, Wohlschlegel, James, Park, Sung Kyu, Xu, Tao, Yates, John R.

Journal:

Analytical Chemistry

Year:

2006

Language:

english

File:

PDF, 166 KB

english, 2006

15

d2ome, Software for in vivo Protein Turnover Analysis using Heavy Water Labeling and LC-MS, Reveals Alterations of Hepatic Proteome Dynamics in a Mouse Model of NAFLD.

Sadygov, Rovshan G., Avva, Jayant, Rahman, Mahbubur, Lee, Kwangwon, Ilchenko, Sergei, Kasumov, Takhar, Borzou, Ahmad

Journal:

Journal of Proteome Research

Year:

2018

Language:

english

File:

PDF, 973 KB

english, 2018

16

Proteome dynamics from heavy water metabolic labeling and peptide tandem mass spectrometry

Borzou, Ahmad, Sadygov, Vugar R., Zhang, William, Sadygov, Rovshan G.

Journal:

International Journal of Mass Spectrometry

Year:

2019

Language:

english

File:

PDF, 1.06 MB

english, 2019

17

MS1, MS2, and SQT—three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications

W. Hayes McDonald, David L. Tabb, Rovshan G. Sadygov, Michael J. MacCoss, John Venable, Johannes Graumann, Jeff R. Johnson, Daniel Cociorva, John R. Yates III

Journal:

Rapid Communications in Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 240 KB

english, 2004

18

Proteome Dynamics Reveals Pro-inflammatory Remodeling of Plasma Proteome in a Mouse Model of NAFLD.

Li, Ling, Bebek, Gurkan, Previs, Stephen F, Smith, Jonathan D, Sadygov, Rovshan G., McCullough, Arthur J., Willard, Belinda, Kasumov, Takhar

Journal:

Journal of Proteome Research

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

19

ChromAlign: A Two-Step Algorithmic Procedure for Time Alignment of Three-Dimensional LC−MS Chromatographic Surfaces

Sadygov, Rovshan G., Martin Maroto, Fernando, Hühmer, Andreas F. R.

Journal:

Analytical Chemistry

Year:

2006

Language:

english

File:

PDF, 515 KB

english, 2006

20

Poisson Model To Generate Isotope Distribution for Biomolecules

Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2017

Language:

english

File:

PDF, 1.68 MB

english, 2017

21

Use of Theoretical Peptide Distributions in Phosphoproteome Analysis

Kalita, Mridul, Kasumov, Takhar, Brasier, Allan R., Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 359 KB

english, 2013

22

Electronic structure aspects of the spin-forbidden reaction CH[sub 3](X [sup 2]A[sub 2][sup ʺ])+N([sup 4]S)→HCN(X [sup 1]Σ[sup +])+H[sub 2](X [sup 1]Σ[sub g][sup +])

Sadygov, Rovshan G., Yarkony, David R.

Journal:

The Journal of Chemical Physics

Year:

1997

Language:

english

File:

PDF, 414 KB

english, 1997

23

Resonances in the predissociation of the A 2ΠΩ state of MgBr

Sadygov, Rovshan G., Rostas, Joëlle, Taieb, Guy, Yarkony, David R.

Journal:

The Journal of Chemical Physics

Year:

1997

Language:

english

File:

PDF, 469 KB

english, 1997

24

Assigning in vivo carbamylation and acetylation in human lens proteins using tandem mass spectrometry and database searching

Zee-Yong Park, Rovshan Sadygov, Judy M. Clark, John I. Clark, John R. Yates III

Journal:

International Journal of Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 2.26 MB

english, 2007

25

Statistical Models for Protein Validation Using Tandem Mass Spectral Data and Protein Amino Acid Sequence Databases

Sadygov, Rovshan G., Liu, Hongbin, Yates, John R.

Journal:

Analytical Chemistry

Year:

2004

Language:

english

File:

PDF, 122 KB

english, 2004

26

SVM Model for Quality Assessment of Medium Resolution Mass Spectra from 18 O-Water Labeling Experiments

Nefedov, Alexey V., Gilski, Miroslaw J., Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 2.46 MB

english, 2011

27

Use of singular value decomposition analysis to differentiate phosphorylated precursors in strong cation exchange fractions

Sadygov, Rovshan G.

Journal:

ELECTROPHORESIS

Year:

2014

Language:

english

File:

PDF, 335 KB

english, 2014

28

Intramolecular Charge Transfer and Solvent-Polarity Dependence of Radiative Decay Rate in Photoexcited Dinaphthylamines

Wang, Shijie, Cai, Jianjian, Sadygov, Rovshan, Lim, Edward C.

Journal:

Journal of Physical Chemistry

Year:

1995

Language:

english

File:

PDF, 479 KB

english, 1995

29

Cardiac mitochondrial proteome dynamics with heavy water reveals stable rate of mitochondrial protein synthesis in heart failure despite decline in mitochondrial oxidative capacity

Shekar, Kadambari Chandra, Li, Ling, Dabkowski, Erinne R., Xu, Wenhong, Ribeiro, Rogerio Faustino, Hecker, Peter A., Recchia, Fabio A., Sadygov, Rovshan G., Willard, Belinda, Kasumov, Takhar, Stanley,

Journal:

Journal of Molecular and Cellular Cardiology

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

30

A New Probabilistic Database Search Algorithm for ETD Spectra

Sadygov, Rovshan G., Good, David M., Swaney, Danielle L., Coon, Joshua J.

Journal:

Journal of Proteome Research

Year:

2009

Language:

english

File:

PDF, 776 KB

english, 2009

31

On the adiabatic to diabatic states transformation in the presence of a conical intersection: A most diabatic basis from the solution to a Poisson’s equation. I

Sadygov, Rovshan G., Yarkony, David R.

Journal:

The Journal of Chemical Physics

Year:

1998

Language:

english

File:

PDF, 394 KB

english, 1998

32

Increased Serotransferrin and Ceruloplasmin Turnover in Diet-Controlled Patients with Type 2 Diabetes

Golizeh, Makan, Lee, Kwangwon, Ilchenko, Serguei, Ösme, Abdullah, Bena, James, Sadygov, Rovshan, Kashyap, Sangeeta, Kasumov, Takhar

Journal:

Free Radical Biology and Medicine

Year:

2017

Language:

english

File:

PDF, 1.42 MB

english, 2017

33

Using SEQUEST with Theoretically Complete Sequence Databases

Sadygov, Rovshan G.

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2015

Language:

english

File:

PDF, 667 KB

english, 2015

34

A theoretical study of the structure and energetics of stacked dimers of polycyclic aromatic hydrocarbons. Application of INDO 1/S method to singlet excimers of naphthalene and phenanthrene

Rovshan G. Sadygov, Edward C. Lim

Journal:

Chemical Physics Letters

Year:

1994

Language:

english

File:

PDF, 633 KB

english, 1994

35

Charger: Combination of Signal Processing and Statistical Learning Algorithms for Precursor Charge-State Determination from Electron-Transfer Dissociation Spectra

Sadygov, Rovshan G., Hao, Zhiqi, Huhmer, Andreas F. R.

Journal:

Analytical Chemistry

Year:

2008

Language:

english

File:

PDF, 406 KB

english, 2008

36

Code Developments to Improve the Efficiency of Automated MS/MS Spectra Interpretation

Sadygov, Rovshan G., Eng, Jimmy, Durr, Eberhard, Saraf, Anita, McDonald, Hayes, MacCoss, Michael J., Yates, John R.

Journal:

Journal of Proteome Research

Year:

2002

Language:

english

File:

PDF, 64 KB

english, 2002

37

Tracer-based estimates of protein flux in cases of incomplete product renewal: evidence and implications of heterogeneity in collagen turnover

Zhou, Haihong, Wang, Sheng-Ping, Herath, Kithsiri, Kasumov, Takhar, Sadygov, Rovshan G., Previs, Stephen F., Kelley, David E.

Journal:

American Journal of Physiology-Endocrinology and Metabolism

Year:

2015

Language:

english

File:

PDF, 484 KB

english, 2015

38

A parallel method for enumerating amino acid compositions and masses of all theoretical peptides

Alexey V Nefedov, Rovshan G Sadygov

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 301 KB

english, 2011

39

Using Power Spectrum Analysis to Evaluate 18 O-Water Labeling Data Acquired from Low Resolution Mass Spectrometers

Sadygov, Rovshan G., Zhao, Yingxin, Haidacher, Sigmund J., Starkey, Jonathan M., Tilton, Ronald G., Denner, Larry

Journal:

Journal of Proteome Research

Year:

2010

Language:

english

File:

PDF, 856 KB

english, 2010

40

Mixed-effects model of epithelial–mesenchymal transition reveals rewiring of signaling networks

Desai, Poonam, Yang, Jun, Tian, Bing, Sun, Hong, Kalita, Mridul, Ju, Hyunsu, Paulucci-Holthauzen, Adriana, Zhao, Yingxin, Brasier, Allan R., Sadygov, Rovshan G.

Journal:

Cellular Signalling

Year:

2015

Language:

english

File:

PDF, 4.43 MB

english, 2015

41

Detection of Structural and Metabolic Changes in Traumatically Injured Hippocampus by Quantitative Differential Proteomics

Wu, Ping, Zhao, Yingxin, Haidacher, Sigmund J., Wang, Enyin, Parsley, Margaret O., Gao, Junling, Sadygov, Rovshan G., Starkey, Jonathan M., Luxon, Bruce A., Spratt, Heidi, DeWitt, Douglas S., Prough,

Journal:

Journal of Neurotrauma

Year:

2013

Language:

english

File:

PDF, 539 KB

english, 2013

42

Intramolecular Photoassociation and Photoinduced Charge Transfer in Bridged Diaryl Compounds.7.A Semiempirical MO Study of Intramolecular Charge Transfer in the Excited Singlet States of Dinaphthylamines

Chen, Donghai, Sadygov, Rovshan, Lim, Edward C.

Journal:

Journal of Physical Chemistry

Year:

1994

Language:

english

File:

PDF, 1.21 MB

english, 1994

43

Examining Troughs in the Mass Distribution of All Theoretically Possible Tryptic Peptides

Nefedov, Alexey V., Mitra, Indranil, Brasier, Allan R., Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 2.76 MB

english, 2011

44

The Cancer Drug Tamoxifen: A Potential Therapeutic Treatment for Spinal Cord Injury

Guptarak, Jutatip, Wiktorowicz, John E., Sadygov, Rovshan G., Zivadinovic, Dragoslava, Paulucci-Holthauzen, Adriana A., Vergara, Leoncio, Nesic, Olivera

Journal:

Journal of Neurotrauma

Year:

2014

Language:

english

File:

PDF, 1.49 MB

english, 2014

45

Gaussian Process Modeling of Protein Turnover

Rahman, Mahbubur, Previs, Stephen F, Kasumov, Takhar, Sadygov, Rovshan G.

Journal:

Journal of Proteome Research

Year:

2016

Language:

english

File:

PDF, 540 KB

english, 2016

46

Hepatic mitochondrial defects in a mouse model of NAFLD are associated with increased degradation of oxidative phosphorylation subunits.

Lee, Kwangwon, Haddad, Andrew, Osme, Abdullah, Kim, Chunki, Borzou, Ahmad, Ilchenko, Sergei, Allende, Daniela, Dasarathy, Srinivasan, McCullough, Arthur J., Sadygov, Rovshan G., Kasumov, Takhar

Journal:

Molecular & Cellular Proteomics

Year:

2018

Language:

english

File:

PDF, 1.02 MB

english, 2018

47

Another Look at Matrix Correlations

Borzou, Ahmad, Yousefi, Razie, Sadygov, Rovshan G, Elofsson, Arne

Journal:

Year:

2019

File:

PDF, 791 KB

2019

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